ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1sm1J1 - ECOD Domain | ECOD

ECOD/Domains/e1sm1J1

e1sm1J1

UID: 002044201

PDB

Range: J:4-140
PDB: 1SM1 chain J(all domains)
UniProt: Q9RSK9 (all domains)
Gene: rplO

Molecule: Large ribosomal subunit protein uL15 (50S ribosomal protein L15)

3D Structure

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Related Domains

Browse other domains in Ribosomal_L27A, PF29471 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRibosomal protein L13/L15p/L18e/L32e(2490)

HH-groupRibosomal proteins L15p and L18e(2490.3)

TT-groupRibosomal proteins L15p and L18e(2490.3.1)

FFamilyRibosomal_L27A, PF29471(2490.3.1.3)

Pfam Families

PF00828Ribosomal_L27A

Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A

ClanCL0588Ribos_L15p_L18e

PF29471Ribosomal_uL15_N

Ribosomal protein uL15, N-terminal region

External Links

ECOD PDB View: 1SM1 RCSB PDB: 1SM1 PDBe: 1SM1 UniProt: Q9RSK9

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