ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jskB4 - ECOD Domain | ECOD

ECOD/Domains/e5jskB4

e5jskB4

UID: 002045128

PDB

Range: B:97-275,B:325-405
PDB: 5JSK chain B(all domains)
UniProt: Q72AS3 (all domains)
Gene: hysA

Molecule: Periplasmic [NiFeSe] hydrogenase, large subunit, selenocysteine-containing

3D Structure

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Related Domains

Browse other domains in NiFeSe_Hases →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in nickel-iron hydrogenase, large subunit(4025)

HH-groupalpha-helical domain in nickel-iron hydrogenase, large subunit(4025.1)

TT-groupalpha-helical domain in nickel-iron hydrogenase, large subunit(4025.1.1)

FFamilyNiFeSe_Hases(4025.1.1.2)

Ligands

in contact, ≤ 4 Å

Hydrosulfuric acidH2S
Iron/sulfur clusterSF4

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00374NiFeSe_Hases

Nickel-dependent hydrogenase

External Links

ECOD PDB View: 5JSK RCSB PDB: 5JSK PDBe: 5JSK UniProt: Q72AS3

Downloads

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