ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5pydA2 - ECOD Domain | ECOD

ECOD/Domains/e5pydA2

e5pydA2

UID: 002045955

PDB

Range: A:701-752
PDB: 5PYD chain A(all domains)
UniProt: P23497 (all domains)
Gene: SP100

Molecule: Nuclear autoantigen Sp-100 (Nuclear dot-associated Sp100 protein) (Speckled 100 kDa)

3D Structure

Loading viewer...

Related Domains

Browse other domains in PHD →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyPHD(376.1.3.1)

Pfam Families

PHD-finger

ClanCL0229RING

External Links

ECOD PDB View: 5PYD RCSB PDB: 5PYD PDBe: 5PYD UniProt: P23497

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure