ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5b5nH2 - ECOD Domain | ECOD

ECOD/Domains/e5b5nH2

e5b5nH2

UID: 002046535

PDB

Range: H:2-34
PDB: 5B5N chain H(all domains)
UniProt: D2Z0P9 (all domains)
Gene: puhA

Molecule: Photosynthetic reaction center H subunit

3D Structure

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Related Domains

Browse other domains in PRCH →

Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II reaction centre subunit H, transmembrane region(5002)

HH-groupPhotosystem II reaction centre subunit H, transmembrane region(5002.1)

TT-groupPhotosystem II reaction centre subunit H, transmembrane region(5002.1.1)

FFamilyPRCH(5002.1.1.1)

Ligands

in contact, ≤ 4 Å

1,2-dihexadecanoyl-sn-glycero-3-phosphoethanolaminePEF
drugDrugBank DB01728

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Pfam Families

Photosynthetic reaction centre, H-chain N-terminal region

ClanCL0350PRC-barrel

External Links

ECOD PDB View: 5B5N RCSB PDB: 5B5N PDBe: 5B5N UniProt: D2Z0P9

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.