ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5wviZ2 - ECOD Domain | ECOD

ECOD/Domains/e5wviZ2

e5wviZ2

UID: 002047332

PDB

Range: Z:49-365
PDB: 5WVI chain Z(all domains)
UniProt: P38764 (all domains)
Gene: RPN1

Molecule: 26S proteasome regulatory subunit RPN1 (HMG-CoA reductase degradation protein 2) (Proteasome non-ATPase subunit 1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RPN1_RPN2_N →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-group26S proteasome subunit Rpn2 N-terminal domain(109.34)

TT-group26S proteasome subunit Rpn2 N-terminal domain(109.34.1)

FFamilyRPN1_RPN2_N(109.34.1.1)

Pfam Families

PF17781RPN1_RPN2_N

RPN1 N-terminal domain

ClanCL0020TPR

External Links

ECOD PDB View: 5WVI RCSB PDB: 5WVI PDBe: 5WVI UniProt: P38764

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure