ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jwaH3 - ECOD Domain | ECOD

ECOD/Domains/e5jwaH3

e5jwaH3

UID: 002051787

PDB

Range: H:468-533
PDB: 5JWA chain H(all domains)
UniProt: Q8I302 (all domains)
Gene: PF3D7_0915000

Molecule: NADH dehydrogenase, putative

3D Structure

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Related Domains

Browse other domains in NDH2_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupFAD/NAD-linked reduatases, dimerisation (C-terminal) domain(244.2)

TT-groupFAD/NAD-linked reduatases, dimerisation (C-terminal) domain(244.2.1)

FFamilyNDH2_C(244.2.1.10)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
1-{2-[2-(2-Methoxyethoxy)Ethoxy]Ethoxy}-4-(1,1,3,3-Tetramethylbutyl)BenzeneTRT
drugDrugBank DB02080

Pfam Families

NDH2 C-terminal domain

External Links

ECOD PDB View: 5JWA RCSB PDB: 5JWA PDBe: 5JWA UniProt: Q8I302

Downloads

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+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.