ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jwbA4 - ECOD Domain | ECOD

ECOD/Domains/e5jwbA4

e5jwbA4

UID: 002053974

PDB

Range: A:468-533
PDB: 5JWB chain A(all domains)
UniProt: Q8I302 (all domains)
Gene: PF3D7_0915000

Molecule: Type II NADH:ubiquinone oxidoreductase

3D Structure

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Related Domains

Browse other domains in NDH2_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupFAD/NAD-linked reduatases, dimerisation (C-terminal) domain(244.2)

TT-groupFAD/NAD-linked reduatases, dimerisation (C-terminal) domain(244.2.1)

FFamilyNDH2_C(244.2.1.10)

Ligands

in contact, ≤ 4 Å

3-(cyclohexylamino)propanesulfonic acidCXS
drugDrugBank DB02219
Flavin adenine dinucleotideFAD
drugDrugBank DB03147

Pfam Families

NDH2 C-terminal domain

External Links

ECOD PDB View: 5JWB RCSB PDB: 5JWB PDBe: 5JWB UniProt: Q8I302

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

NadideNAD

drugDrugBank DB14128

1-{2-[2-(2-Methoxyethoxy)Ethoxy]Ethoxy}-4-(1,1,3,3-Tetramethylbutyl)BenzeneTRT

drugDrugBank DB02080

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.