ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jwbH2 - ECOD Domain | ECOD

ECOD/Domains/e5jwbH2

e5jwbH2

UID: 002053976

PDB

Range: H:360-430
PDB: 5JWB chain H(all domains)
UniProt: Q8I302 (all domains)
Gene: PF3D7_0915000

Molecule: Type II NADH:ubiquinone oxidoreductase

3D Structure

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Related Domains

Browse other domains in PfNDH2_hel_ins →

Classification

AArchitecturealpha arrays(a.6)

XX-groupEF-hand(108)

HH-groupHelical insertion domain in malaria PfNDH2(108.5)

TT-groupHelical insertion domain in malaria PfNDH2(108.5.1)

FFamilyPfNDH2_hel_ins(108.5.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22365PfNDH2_hel_ins

PfNDH2 helical insertion domain

External Links

ECOD PDB View: 5JWB RCSB PDB: 5JWB PDBe: 5JWB UniProt: Q8I302

Downloads

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