ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jvlA3 - ECOD Domain | ECOD

ECOD/Domains/e5jvlA3

e5jvlA3

UID: 002055390

PDB

Range: A:517-874
PDB: 5JVL chain A(all domains)
UniProt: P22221 (all domains)
Gene: PPDK

Molecule: Pyruvate, phosphate dikinase, chloroplastic

3D Structure

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Related Domains

Browse other domains in PEP-utilizers_C →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPEP-utilizers_C(2002.1.1.105)

Ligands

in contact, ≤ 4 Å

PhosphoenolpyruvatePEP
drugDrugBank DB01819
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02896PEP-utilizers_C

PEP-utilising enzyme, PEP-binding domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5JVL RCSB PDB: 5JVL PDBe: 5JVL UniProt: P22221

Downloads

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