ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5j44A2 - ECOD Domain | ECOD

ECOD/Domains/e5j44A2

e5j44A2

UID: 002060705

RepresentativePDB

Range: A:258-1006
PDB: 5J44 chain A(all domains)
UniProt: Q8VSL2 (all domains)
Gene: sepA

Molecule: Serine protease SepA autotransporter (EC 3.4.21.-) [Cleaved into: Serine protease SepA; Serine protease SepA translocator]

3D Structure

Loading viewer...

Related Domains

Browse other domains in Beta-sol_PIC_HAP1_IgA0_2nd →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyBeta-sol_PIC_HAP1_IgA0_2nd(207.2.1.60)

Pfam Families

PF24078Beta-sol_PIC_HAP1_IgA0_2nd

PIC/HAP1/IgA0 second beta-solenoid repeat region

ClanCL0268Pec_lyase-like

External Links

ECOD PDB View: 5J44 RCSB PDB: 5J44 PDBe: 5J44 UniProt: Q8VSL2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure