ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3j47V1 - ECOD Domain | ECOD

ECOD/Domains/e3j47V1

e3j47V1

UID: 002061993

PDB

Range: V:230-298
PDB: 3J47 chain V(all domains)
UniProt: P43588 (all domains)
Gene: RPN11

Molecule: Ubiquitin C-terminal hydrolase RPN11 (EC 3.4.19.12) (26S proteasome regulatory subunit RPN11) (Protein MPR1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RPN11_C →

Classification

AArchitectureextended segments(a.20)

XX-group26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain(3748)

HH-group26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain(3748.1)

TT-group26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain(3748.1.1)

FFamilyRPN11_C(3748.1.1.4)

Pfam Families

PF23594RPN11_C

26S proteasome regulatory subunit RPN11 C-terminal domain

External Links

ECOD PDB View: 3J47 RCSB PDB: 3J47 PDBe: 3J47 UniProt: P43588

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure