ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5e5lC2 - ECOD Domain | ECOD

ECOD/Domains/e5e5lC2

e5e5lC2

UID: 002062990

PDB

Range: C:122-251
PDB: 5E5L chain C(all domains)
UniProt: O53638 (all domains)
Gene: ldtA

Molecule: L,D-transpeptidase 1 (LDT 1) (EC 2.3.2.-) (Ldt(Mt1))

3D Structure

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Related Domains

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Classification

AArchitecturebeta complex topology(a.5)

XX-groupL,D-transpeptidase catalytic domain-like(4091)

HH-groupL,D-transpeptidase catalytic domain-like(4091.1)

TT-groupL,D-transpeptidase catalytic domain-like(4091.1.1)

FFamilyYkuD(4091.1.1.1)

Pfam Families

L,D-transpeptidase catalytic domain

ClanCL0508YkuD

External Links

ECOD PDB View: 5E5L RCSB PDB: 5E5L PDBe: 5E5L UniProt: O53638

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