ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nffM1 - ECOD Domain | ECOD

ECOD/Domains/e5nffM1

e5nffM1

UID: 002067194

PDB

Range: M:80-235
PDB: 5NFF chain M(all domains)
UniProt: C6ZK00 (all domains)
Gene: GPC

Molecule: Pre-glycoprotein polyprotein GP complex (Pre-GP-C) [Cleaved into: Stable signal peptide (SSP); Glycoprotein G1 (GP1); Glycoprotein G2 (GP2)]

3D Structure

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Related Domains

Browse other domains in Arena_glycoprot →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupEnvelope glycoprotein GP1(3081)

HH-groupEnvelope glycoprotein GP1(3081.1)

TT-groupEnvelope glycoprotein GP1(3081.1.1)

FFamilyArena_glycoprot(3081.1.1.1)

Pfam Families

PF00798Arena_glycoprot

Arenavirus glycoprotein

External Links

ECOD PDB View: 5NFF RCSB PDB: 5NFF PDBe: 5NFF UniProt: C6ZK00

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