ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ng5J3 - ECOD Domain | ECOD

ECOD/Domains/e5ng5J3

e5ng5J3

UID: 002067243

PDB

Range: J:674-724,J:813-868
PDB: 5NG5 chain J(all domains)
UniProt: P31224 (all domains)
Gene: acrB

Molecule: Multidrug efflux pump subunit AcrB (AcrAB-TolC multidrug efflux pump subunit AcrB) (Acridine resistance protein B)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFerredoxin domains in multidrug efflux transporter(304.28)

TT-groupMultidrug efflux transporter AcrB pore domain(304.28.1)

FFamilyACR_tran(304.28.1.1)

Pfam Families

PF00873ACR_tran

AcrB/AcrD/AcrF family

ClanCL0322RND_permease

External Links

ECOD PDB View: 5NG5 RCSB PDB: 5NG5 PDBe: 5NG5 UniProt: P31224

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