ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hvmB2 - ECOD Domain | ECOD

ECOD/Domains/e5hvmB2

e5hvmB2

UID: 002071006

PDB

Range: B:12-248
PDB: 5HVM chain B(all domains)
UniProt: Q4WLM9 (all domains)
Gene: tpsA

Molecule: Alpha,alpha-trehalose-phosphate synthase (UDP-forming)

3D Structure

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Related Domains

Browse other domains in Glyco_transf_20 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyGlyco_transf_20(7512.1.1.6)

Ligands

in contact, ≤ 4 Å

Uridine-5'-DiphosphateUDP
drugDrugBank DB03435within 5 Å only
(1S,2S,3R,6S)-4-(HYDROXYMETHYL)-6-{[(1S,2S,3S,4R,5R)-2,3,4-TRIHYDROXY-5-(HYDROXYMETHYL)CYCLOHEXYL]AMINO}CYCLOHEX-4-ENE-1,2,3-TRIOLVDM

Shown in the structure viewer.

Pfam Families

PF00982Glyco_transf_20

Glycosyltransferase family 20

ClanCL0113GT-B

External Links

ECOD PDB View: 5HVM RCSB PDB: 5HVM PDBe: 5HVM UniProt: Q4WLM9

Downloads

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Drug annotations from DrugDomain.