ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5v8lD3 - ECOD Domain | ECOD

ECOD/Domains/e5v8lD3

e5v8lD3

UID: 002071522

PDB

Range: D:256-473
PDB: 5V8L chain D(all domains)
UniProt: Q2N0S6 (all domains)
Gene: env

Molecule: Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) (Glycoprotein 120) (gp120); Transmembrane protein gp41 (TM) (Glycoprotein 41) (gp41)]

3D Structure

Loading viewer...

Related Domains

Browse other domains in GP120 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein L31e-like(259)

HH-groupRibosomal protein L31e/gp120 outer domain(259.1)

TT-groupRibosomal protein L31e/gp120 outer domain(259.1.1)

FFamilyGP120(259.1.1.1)

Pfam Families

Envelope glycoprotein GP120

External Links

ECOD PDB View: 5V8L RCSB PDB: 5V8L PDBe: 5V8L UniProt: Q2N0S6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure