ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nkkC2 - ECOD Domain | ECOD

ECOD/Domains/e5nkkC2

e5nkkC2

UID: 002074966

PDB

Range: C:1-194,C:217-254,C:289-332
PDB: 5NKK chain C(all domains)
UniProt: O62301 (all domains)
Gene: smg-8

Molecule: Nonsense-mediated mRNA decay factor SMG8 (Suppressor with morphogenetic effect on genitalia protein 8)

3D Structure

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Related Domains

Browse other domains in Smg8_Smg9 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySmg8_Smg9(2004.1.1.171)

Pfam Families

PF10220Smg8_Smg9

Smg8_Smg9

External Links

ECOD PDB View: 5NKK RCSB PDB: 5NKK PDBe: 5NKK UniProt: O62301

Downloads

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