ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5myvA1 - ECOD Domain | ECOD

ECOD/Domains/e5myvA1

e5myvA1

UID: 002075070

RepresentativePDB

Range: A:79-252,A:522-699
PDB: 5MYV chain A(all domains)
UniProt: P78362 (all domains)
Gene: SRPK2

Molecule: SRSF protein kinase 2,SRSF protein kinase 2

3D Structure

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Related Domains

Browse other domains in Pkinase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase(206.1.1.1)

Ligands

in contact, ≤ 4 Å

5-methyl-~{N}-[2-(4-methylpiperazin-1-yl)-5-(trifluoromethyl)phenyl]furan-2-carboxamideW4A

+ 2 additives (Dimethyl sulfoxide, Sulfate ion)

Dimethyl sulfoxideDMS
DrugBank DB01093
Sulfate ion

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

External Links

ECOD PDB View: 5MYV RCSB PDB: 5MYV PDBe: 5MYV UniProt: P78362

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.