ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m60A1 - ECOD Domain | ECOD

ECOD/Domains/e5m60A1

e5m60A1

UID: 002075235

PDB

Range: A:397-783
PDB: 5M60 chain A(all domains)
UniProt: G0S3N2 (all domains)
Gene: CTHT_0021860

Molecule: Beta-1,3-glucanase

3D Structure

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Related Domains

Browse other domains in Pectate_lyase_3 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyPectate_lyase_3(207.2.1.20)

Ligands

in contact, ≤ 4 Å

Beta-D-GlucoseBGC
drugDrugBank DB02379
Sodium ionNA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF12708Pect-lyase_RHGA_epim

Rhamnogalacturonase A/epimerase, pectate lyase-like

ClanCL0268Pec_lyase-like

External Links

ECOD PDB View: 5M60 RCSB PDB: 5M60 PDBe: 5M60 UniProt: G0S3N2

Downloads

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