ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ul5A1 - ECOD Domain | ECOD

ECOD/Domains/e5ul5A1

e5ul5A1

UID: 002075437

PDB

Range: A:1-533
PDB: 5UL5 chain A(all domains)
UniProt: Q28175 (all domains)
Gene: RPE65

Molecule: Retinoid isomerohydrolase

3D Structure

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Related Domains

Browse other domains in RPE65 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyRPE65(5.1.4.15)

Ligands

in contact, ≤ 4 Å

PentaglymePG6
drugDrugBank DB02580
Palmitic AcidPLM
drugDrugBank DB03796
(1R)-3-amino-1-{3-[(2-propylpentyl)oxy]phenyl}propan-1-ol

Pfam Families

Retinal pigment epithelial membrane protein

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 5UL5 RCSB PDB: 5UL5 PDBe: 5UL5 UniProt: Q28175

Downloads

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FE (II) IONFE2

metal

Sodium ionNA

metal

Shown in the structure viewer. Drug annotations from DrugDomain.