ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5u2sA2 - ECOD Domain | ECOD

ECOD/Domains/e5u2sA2

e5u2sA2

UID: 002077377

PDB

Range: A:6-91
PDB: 5U2S chain A(all domains)
UniProt: P06746 (all domains)
Gene: POLB

Molecule: DNA polymerase beta

3D Structure

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Related Domains

Browse other domains in HHH_8 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupSAM domain-like(102.1.1)

FFamilyHHH_8(102.1.1.30)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Helix-hairpin-helix domain

ClanCL0198HHH

External Links

ECOD PDB View: 5U2S RCSB PDB: 5U2S PDBe: 5U2S UniProt: P06746

Downloads

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