ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5v6rB1 - ECOD Domain | ECOD

ECOD/Domains/e5v6rB1

e5v6rB1

UID: 002080678

PDB

Range: B:1546-1671
PDB: 5V6R chain B(all domains)
UniProt: Q3UH93 (all domains)
Gene: Plxnd1

Molecule: Plexin-D1

3D Structure

Loading viewer...

Related Domains

Browse other domains in Plexin_RBD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyPlexin_RBD(221.1.1.67)

Pfam Families

PF20170Plexin_RBD

Plexin cytoplasmic RhoGTPase-binding domain

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 5V6R RCSB PDB: 5V6R PDBe: 5V6R UniProt: Q3UH93

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure