ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kxvA1 - ECOD Domain | ECOD

ECOD/Domains/e5kxvA1

e5kxvA1

UID: 002081088

PDB

Range: A:1-279
PDB: 5KXV chain A(all domains)
UniProt: P06873 (all domains)
Gene: PROK

Molecule: Proteinase K

3D Structure

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Related Domains

Browse other domains in Peptidase_S8 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupSubtilisin-like(2499)

HH-groupSubtilisin-like(2499.1)

TT-groupSubtilisin-like(2499.1.1)

FFamilyPeptidase_S8(2499.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 2 additives (Glycerin, Nitrate)

GlycerinGOL
DrugBank DB09462
Nitrate

Pfam Families

PF00082Peptidase_S8

Subtilase family

External Links

ECOD PDB View: 5KXV RCSB PDB: 5KXV PDBe: 5KXV UniProt: P06873

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14049

Shown in the structure viewer. Drug annotations from DrugDomain.