ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nw3A1 - ECOD Domain | ECOD

ECOD/Domains/e5nw3A1

e5nw3A1

UID: 002081283

PDB

Range: A:0-53
PDB: 5NW3 chain A(all domains)
UniProt: P24297 (all domains)
Gene: rub

Molecule: Rubredoxin

3D Structure

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Related Domains

Browse other domains in Rubredoxin →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRubredoxin(375.1.1.2)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal
Potassium ionK
metal
Sodium ionNA

Pfam Families

PF00301Rubredoxin

Rubredoxin

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 5NW3 RCSB PDB: 5NW3 PDBe: 5NW3 UniProt: P24297

Downloads

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metal

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.