ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5k5lF1 - ECOD Domain | ECOD

ECOD/Domains/e5k5lF1

e5k5lF1

UID: 002082509

RepresentativePDB

Range: F:436-492
PDB: 5K5L chain F(all domains)
UniProt: P49711 (all domains)
Gene: CTCF

Molecule: Transcriptional repressor CTCF (11-zinc finger protein) (CCCTC-binding factor) (CTCFL paralog)

3D Structure

Loading viewer...

Related Domains

Browse other domains in zf-C2H2+zf-C2H2_4 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupbeta-beta-alpha zinc fingers(386)

HH-groupbeta-beta-alpha zinc fingers(386.1)

TT-groupbeta-beta-alpha zinc fingers(386.1.1)

FFamilyzf-C2H2+zf-C2H2_4(386.1.1.133)

Pfam Families

PF00096zf-C2H2

Zinc finger, C2H2 type

ClanCL0361C2H2-zf

PF13894zf-C2H2_4

C2H2-type zinc finger

ClanCL0361C2H2-zf

External Links

ECOD PDB View: 5K5L RCSB PDB: 5K5L PDBe: 5K5L UniProt: P49711

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure