ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5gnbA2 - ECOD Domain | ECOD

ECOD/Domains/e5gnbA2

e5gnbA2

UID: 002082638

RepresentativePDB

Range: A:311-321,A:612-674
PDB: 5GNB chain A(all domains)
UniProt: Q5MQD0 (all domains)
Gene: S

Molecule: Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike protein S2; Spike protein S2']

3D Structure

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Related Domains

Browse other domains in CoV_S1_C →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupBeta domain of coronavirus spike glycoprotein(1043)

HH-groupBeta domain of coronavirus spike glycoprotein(1043.1)

TT-groupBeta domain of coronavirus spike glycoprotein(1043.1.1)

FFamilyCoV_S1_C(1043.1.1.1)

Pfam Families

PF19209CoV_S1_C

Coronavirus spike glycoprotein S1, C-terminal

External Links

ECOD PDB View: 5GNB RCSB PDB: 5GNB PDBe: 5GNB UniProt: Q5MQD0

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