ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jq1A1 - ECOD Domain | ECOD

ECOD/Domains/e5jq1A1

e5jq1A1

UID: 002082745

PDB

Range: A:151-280
PDB: 5JQ1 chain A(all domains)
UniProt: P07306 (all domains)
Gene: ASGR1

Molecule: Asialoglycoprotein receptor 1

3D Structure

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Related Domains

Browse other domains in Lectin_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupC-type lectin-like(209)

HH-groupC-type lectin-like(209.1)

TT-groupC-type lectin-like(209.1.1)

FFamilyLectin_C(209.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Chloride ionCL
N-[(1S,2R,3R,4R,5S)-2,3-dihydroxy-1-(hydroxymethyl)-6,8-dioxabicyclo[3.2.1]octan-4-yl]acetamideZPF

Pfam Families

PF00059Lectin_C

Lectin C-type domain

ClanCL0056C_Lectin

External Links

ECOD PDB View: 5JQ1 RCSB PDB: 5JQ1 PDBe: 5JQ1 UniProt: P07306

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.