ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jxfB1 - ECOD Domain | ECOD

ECOD/Domains/e5jxfB1

e5jxfB1

UID: 002082761

PDB

Range: B:18-271,B:562-712
PDB: 5JXF chain B(all domains)
UniProt: A6GWM2 (all domains)
Gene: dpp11

Molecule: Asp/Glu-specific dipeptidyl-peptidase

3D Structure

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Related Domains

Browse other domains in Peptidase_S46 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPeptidase_S46(1.1.5.28)

Ligands

in contact, ≤ 4 Å

ArginineARG
drugDrugBank DB00125
Aspartic acidASP
drugDrugBank DB00128

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10459Peptidase_S46

Peptidase S46

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 5JXF RCSB PDB: 5JXF PDBe: 5JXF UniProt: A6GWM2

Downloads

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