ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5mkqB3 - ECOD Domain | ECOD

ECOD/Domains/e5mkqB3

e5mkqB3

UID: 002082897

PDB

Range: B:0-29
PDB: 5MKQ chain B(all domains)
UniProt: O58038 (all domains)
Gene: ttuA

Molecule: tRNA-5-methyluridine(54) 2-sulfurtransferase (EC 2.8.1.-) (tRNA thiouridine synthetase TtuA)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TtuA_LIM_N →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupGlucocorticoid receptor-like(377)

HH-groupLIM domain-like(377.1)

TT-groupLIM domain-like(377.1.1)

FFamilyTtuA_LIM_N(377.1.1.29)

Pfam Families

PF22082TtuA_LIM_N

2-thiouridine synthetase TtuA, N-terminal LIM domain

ClanCL0839Tbcl_zf

External Links

ECOD PDB View: 5MKQ RCSB PDB: 5MKQ PDBe: 5MKQ UniProt: O58038

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure