ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5vswD4 - ECOD Domain | ECOD

ECOD/Domains/e5vswD4

e5vswD4

UID: 002083291

PDB

Range: D:895-931,D:1135-1151,D:1216-1376
PDB: 5VSW chain D(all domains)
UniProt: P0A8T7 (all domains)
Gene: rpoC

Molecule: DNA-directed RNA polymerase subunit beta' (RNAP subunit beta') (EC 2.7.7.6) (RNA polymerase subunit beta') (Transcriptase subunit beta')

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_Rpb1_5 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupcentral helical domain in RNA-polymerase beta-prime subunit(4954)

HH-groupcentral helical domain in RNA-polymerase beta-prime subunit(4954.1)

TT-groupcentral helical domain in RNA-polymerase beta-prime subunit(4954.1.1)

FFamilyRNA_pol_Rpb1_5(4954.1.1.1)

Pfam Families

PF04998RNA_pol_Rpb1_5

RNA polymerase Rpb1, domain 5

External Links

ECOD PDB View: 5VSW RCSB PDB: 5VSW PDBe: 5VSW UniProt: P0A8T7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure