ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vvhD1 - ECOD Domain | ECOD

ECOD/Domains/e5vvhD1

e5vvhD1

UID: 002084852

RepresentativePDB

Range: D:89-161,D:261-298
PDB: 5VVH chain D(all domains)
UniProt: P0A4T3 (all domains)
Gene: occR

Molecule: Octopine catabolism/uptake operon regulatory protein OccR

3D Structure

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Related Domains

Browse other domains in LysR_substrate →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLysR_substrate(7523.1.1.15)

Pfam Families

PF03466LysR_substrate

LysR substrate binding domain

ClanCL0177PBP

External Links

ECOD PDB View: 5VVH RCSB PDB: 5VVH PDBe: 5VVH UniProt: P0A4T3

Downloads

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