ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5mr6M2 - ECOD Domain | ECOD

ECOD/Domains/e5mr6M2

e5mr6M2

UID: 002085237

PDB

Range: M:226-397
PDB: 5MR6 chain M(all domains)
UniProt: I7IIA9 (all domains)
Gene: xiaF

Molecule: XiaF protein

3D Structure

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Related Domains

Browse other domains in Acyl-CoA_dh_2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupAcyl-CoA dehydrogenase C-terminal domain-like(633.6)

TT-groupAcyl-CoA dehydrogenase C-terminal domain-like(633.6.1)

FFamilyAcyl-CoA_dh_2(633.6.1.4)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF08028Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

ClanCL0087Acyl-CoA_dh

External Links

ECOD PDB View: 5MR6 RCSB PDB: 5MR6 PDBe: 5MR6 UniProt: I7IIA9

Downloads

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Drug annotations from DrugDomain.