ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5logB1 - ECOD Domain | ECOD

ECOD/Domains/e5logB1

e5logB1

UID: 002087108

PDB

Range: B:2-220
PDB: 5LOG chain B(all domains)
UniProt: Q50859 (all domains)
Gene: safC

Molecule: Putative O-methyltransferase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Methyltransf_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_3(2003.1.5.14)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
Chloride ionCL
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01596Methyltransf_3

O-methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5LOG RCSB PDB: 5LOG PDBe: 5LOG UniProt: Q50859

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure