ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5paaC1 - ECOD Domain | ECOD

ECOD/Domains/e5paaC1

e5paaC1

UID: 002087272

PDB

Range: C:213-466
PDB: 5PAA chain C(all domains)
UniProt: P08709 (all domains)
Gene: F7

Molecule: Coagulation factor VII heavy chain

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

AminomethylcyclohexaneAMC
drugDrugBank DB02435
Calcium ionCA
metal
Chloride ionCL

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 5PAA RCSB PDB: 5PAA PDBe: 5PAA UniProt: P08709

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Sulfate ion, Glycerol)

Sulfate ionSO4
DrugBank DB14546
GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.