ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5vvhH2 - ECOD Domain | ECOD

ECOD/Domains/e5vvhH2

e5vvhH2

UID: 002088010

PDB

Range: H:90-161,H:261-298
PDB: 5VVH chain H(all domains)
UniProt: P0A4T3 (all domains)
Gene: occR

Molecule: Octopine catabolism/uptake operon regulatory protein OccR

3D Structure

Loading viewer...

Related Domains

Browse other domains in LysR_substrate →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLysR_substrate(7523.1.1.15)

Pfam Families

PF03466LysR_substrate

LysR substrate binding domain

ClanCL0177PBP

External Links

ECOD PDB View: 5VVH RCSB PDB: 5VVH PDBe: 5VVH UniProt: P0A4T3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure