ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5vnjC1 - ECOD Domain | ECOD

ECOD/Domains/e5vnjC1

e5vnjC1

UID: 002088696

PDB

Range: C:1-157
PDB: 5VNJ chain C(all domains)
UniProt: O08547 (all domains)
Gene: Sec22b

Molecule: Vesicle-trafficking protein SEC22b (ER-Golgi SNARE of 24 kDa) (ERS-24) (ERS24) (SEC22 vesicle-trafficking protein homolog B) (SEC22 vesicle-trafficking protein-like 1) (mSec22b)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Longin →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupprofilin-like(223.2)

TT-groupprofilin-like(223.2.1)

FFamilyLongin(223.2.1.15)

Pfam Families

Regulated-SNARE-like domain

ClanCL0431PF

External Links

ECOD PDB View: 5VNJ RCSB PDB: 5VNJ PDBe: 5VNJ UniProt: O08547

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure