ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5leoA1 - ECOD Domain | ECOD

ECOD/Domains/e5leoA1

e5leoA1

UID: 002092800

PDB

Range: A:401-493
PDB: 5LEO chain A(all domains)
UniProt: P10547 (all domains)
Gene: lss

Molecule: Lysostaphin

3D Structure

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Related Domains

Browse other domains in SH3_5 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilySH3_5(4.1.1.59)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives ((4r)-2-Methylpentane-2,4-Diol, Sulfate ion)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

Bacterial SH3 domain

ClanCL0010SH3

External Links

ECOD PDB View: 5LEO RCSB PDB: 5LEO PDBe: 5LEO UniProt: P10547

Downloads

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Drug annotations from DrugDomain.