ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vyqA2 - ECOD Domain | ECOD

ECOD/Domains/e5vyqA2

e5vyqA2

UID: 002093308

PDB

Range: A:176-232
PDB: 5VYQ chain A(all domains)
UniProt: R4MIX2 (all domains)
Gene: J113_23825

Molecule: Uncharacterized protein

3D Structure

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Related Domains

Browse other domains in N_formyltrans_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupFMT C-terminal domain-like(270)

HH-groupFMT C-terminal domain-related(270.1)

TT-groupFMT C-terminal domain-related(270.1.1)

FFamilyN_formyltrans_C(270.1.1.3)

Ligands

in contact, ≤ 4 Å

(6R)-Folinic acidFON
drugDrugBank DB03256
dTDP-4-amino-4,6-dideoxyglucose0FX
Chloride ionCL

Pfam Families

PF18216N_formyltrans_C

N-formyltransferase dimerization C-terminal domain

External Links

ECOD PDB View: 5VYQ RCSB PDB: 5VYQ PDBe: 5VYQ UniProt: R4MIX2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

3-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]PROPANE-1-SULFONIC ACIDEP1

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.