ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5xdqF1 - ECOD Domain | ECOD

ECOD/Domains/e5xdqF1

e5xdqF1

UID: 002093372

PDB

Range: F:1-94
PDB: 5XDQ chain F(all domains)
UniProt: P00428 (all domains)
Gene: COX5B

Molecule: Cytochrome c oxidase subunit 5B, mitochondrial (Cytochrome c oxidase polypeptide VIa) (Cytochrome c oxidase polypeptide Vb)

3D Structure

Loading viewer...

Related Domains

Browse other domains in COX5B →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupCytochrome c oxidase Subunit F(375.1.8)

FFamilyCOX5B(375.1.8.1)

Pfam Families

Cytochrome c oxidase subunit Vb

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 5XDQ RCSB PDB: 5XDQ PDBe: 5XDQ UniProt: P00428

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure