ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5thpQ1 - ECOD Domain | ECOD

ECOD/Domains/e5thpQ1

e5thpQ1

UID: 002097998

PDB

Range: Q:1-122
PDB: 5THP chain Q(all domains)
UniProt: D2YW40 (all domains)

Molecule: Snaclec rhodocetin subunit delta

3D Structure

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Related Domains

Browse other domains in Lectin_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupC-type lectin-like(209)

HH-groupC-type lectin-like(209.1)

TT-groupC-type lectin-like(209.1.1)

FFamilyLectin_C(209.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Sodium ionNA
metal

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL

Pfam Families

PF00059Lectin_C

Lectin C-type domain

ClanCL0056C_Lectin

External Links

ECOD PDB View: 5THP RCSB PDB: 5THP PDBe: 5THP UniProt: D2YW40

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.