ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5weoC5 - ECOD Domain | ECOD

ECOD/Domains/e5weoC5

e5weoC5

UID: 002098324

PDB

Range: C:512-543,C:567-826
PDB: 5WEO chain C(all domains)
UniProt: O88602 (all domains)
Gene: Cacng2

Molecule: Glutamate receptor 2,Voltage-dependent calcium channel gamma-2 subunit chimera

3D Structure

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Related Domains

Browse other domains in Lig_chan →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyLig_chan(5054.1.1.1)

Ligands

in contact, ≤ 4 Å

CyclothiazideCYZ
drugDrugBank DB00606
Glutamic acidGLU
drugDrugBank DB00142

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00060Lig_chan

Ligand-gated ion channel

ClanCL0030Ion_channel

External Links

ECOD PDB View: 5WEO RCSB PDB: 5WEO PDBe: 5WEO UniProt: O88602

Downloads

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