ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vrhA1 - ECOD Domain | ECOD

ECOD/Domains/e5vrhA1

e5vrhA1

UID: 002099001

PDB

Range: A:4-213,A:481-507
PDB: 5VRH chain A(all domains)
UniProt: P23930 (all domains)
Gene: lnt

Molecule: Apolipoprotein N-acyltransferase

3D Structure

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Related Domains

Browse other domains in LNT_N →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupApolipoprotein N-acyltransferase transmembrane domain(1175)

HH-groupApolipoprotein N-acyltransferase transmembrane domain(1175.1)

TT-groupApolipoprotein N-acyltransferase transmembrane domain(1175.1.1)

FFamilyLNT_N(1175.1.1.1)

Ligands

in contact, ≤ 4 Å

Palmitic AcidPLM
drugDrugBank DB03796
(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoateOLB
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoateOLC

Pfam Families

Apolipoprotein N-acyltransferase N-terminal domain

External Links

ECOD PDB View: 5VRH RCSB PDB: 5VRH PDBe: 5VRH UniProt: P23930

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.