ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5l0sB1 - ECOD Domain | ECOD

ECOD/Domains/e5l0sB1

e5l0sB1

UID: 002099354

PDB

Range: B:47-85
PDB: 5L0S chain B(all domains)
UniProt: P08709 (all domains)
Gene: F7

Molecule: Coagulation factor VII

3D Structure

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Related Domains

Browse other domains in EGF →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupEGF-like(389)

HH-groupEGF-related(389.1)

TT-groupEGF/Laminin(389.1.1)

FFamilyEGF(389.1.1.1)

Ligands

in contact, ≤ 4 Å

Uridine-5'-DiphosphateUDP
drugDrugBank DB03435within 5 Å only
Calcium ionCA
metal
Chloride ion

Pfam Families

EGF-like domain

ClanCL0001EGF

External Links

ECOD PDB View: 5L0S RCSB PDB: 5L0S PDBe: 5L0S UniProt: P08709

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.