ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5tbpA1 - ECOD Domain | ECOD

ECOD/Domains/e5tbpA1

e5tbpA1

UID: 002099681

PDB

Range: A:263-460
PDB: 5TBP chain A(all domains)
UniProt: P19793 (all domains)
Gene: RXRA

Molecule: Retinoic acid receptor RXR-alpha

3D Structure

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Related Domains

Browse other domains in Hormone_recep →

Classification

AArchitecturealpha arrays(a.6)

XX-groupNuclear receptor ligand-binding domain(188)

HH-groupNuclear receptor ligand-binding domain(188.1)

TT-groupNuclear receptor ligand-binding domain(188.1.1)

FFamilyHormone_recep(188.1.1.1)

Ligands

in contact, ≤ 4 Å

[(1Z)-5-fluoro-2-methyl-1-{[4-(propan-2-yl)phenyl]methylidene}-1H-inden-3-yl]acetic acid7A4

+ 2 additives (Acetate, Dimethyl sulfoxide)

AcetateACT
DrugBank DB14511
Dimethyl sulfoxide

Pfam Families

PF00104Hormone_recep

Ligand-binding domain of nuclear hormone receptor

External Links

ECOD PDB View: 5TBP RCSB PDB: 5TBP PDBe: 5TBP UniProt: P19793

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.