ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5tdmA2 - ECOD Domain | ECOD

ECOD/Domains/e5tdmA2

e5tdmA2

UID: 002099694

PDB

Range: A:2-245
PDB: 5TDM chain A(all domains)
UniProt: P53396 (all domains)
Gene: ACLY

Molecule: ATP-citrate synthase

3D Structure

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Related Domains

Browse other domains in Citrate_synth_N →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilyCitrate_synth_N(206.1.3.47)

Ligands

in contact, ≤ 4 Å

AdenosineADN
drugDrugBank DB00640
Adenosine disphosphateADP
drugDrugBank DB16833
Magnesium ion

Pfam Families

PF24948Citrate_synth_N

ATP-citrate synthase ATP-grasp domain

ClanCL0179ATP-grasp

External Links

ECOD PDB View: 5TDM RCSB PDB: 5TDM PDBe: 5TDM UniProt: P53396

Downloads

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metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.