ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5tdmB2 - ECOD Domain | ECOD

ECOD/Domains/e5tdmB2

e5tdmB2

UID: 002099696

PDB

Range: B:488-623
PDB: 5TDM chain B(all domains)
UniProt: P53396 (all domains)
Gene: ACLY

Molecule: ATP-citrate synthase

3D Structure

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Related Domains

Browse other domains in CoA_binding →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyCoA_binding(2003.1.1.32)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02629CoA_binding

CoA binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5TDM RCSB PDB: 5TDM PDBe: 5TDM UniProt: P53396

Downloads

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