ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5tdzA1 - ECOD Domain | ECOD

ECOD/Domains/e5tdzA1

e5tdzA1

UID: 002099697

PDB

Range: A:246-431
PDB: 5TDZ chain A(all domains)
UniProt: P53396 (all domains)
Gene: ACLY

Molecule: ATP-citrate synthase

3D Structure

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Related Domains

Browse other domains in Citrate_bind →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupSuccinyl-CoA synthetase domains(2007.3)

TT-groupSuccinyl-CoA synthetase domains(2007.3.1)

FFamilyCitrate_bind(2007.3.1.4)

Ligands

in contact, ≤ 4 Å

L-tartaric acidTLA
drugDrugBank DB09459

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF16114Citrate_bind

ATP citrate lyase citrate-binding

ClanCL0506Succ_CoA_synth

External Links

ECOD PDB View: 5TDZ RCSB PDB: 5TDZ PDBe: 5TDZ UniProt: P53396

Downloads

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Phosphate ion

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.