ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5tdzB1 - ECOD Domain | ECOD

ECOD/Domains/e5tdzB1

e5tdzB1

UID: 002099699

PDB

Range: B:624-810
PDB: 5TDZ chain B(all domains)
UniProt: P53396 (all domains)
Gene: ACLY

Molecule: ATP-citrate synthase

3D Structure

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Related Domains

Browse other domains in Ligase_CoA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupSuccinyl-CoA synthetase domains(2007.3)

TT-groupSuccinyl-CoA synthetase domains(2007.3.1)

FFamilyLigase_CoA(2007.3.1.1)

Ligands

in contact, ≤ 4 Å

L-tartaric acidTLA
drugDrugBank DB09459

+ 3 additives (Glycerin, Phosphate ion, Tromethamine)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF00549Ligase_CoA

CoA-ligase

ClanCL0506Succ_CoA_synth

External Links

ECOD PDB View: 5TDZ RCSB PDB: 5TDZ PDBe: 5TDZ UniProt: P53396

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Phosphate ionPO4

DrugBank DB14523

TromethamineTRS

DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.