ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5wmfE1 - ECOD Domain | ECOD

ECOD/Domains/e5wmfE1

e5wmfE1

UID: 002099977

PDB

Range: E:477-611
PDB: 5WMF chain E(all domains)
UniProt: P03211 (all domains)
Gene: EBNA1

Molecule: Epstein-Barr nuclear antigen 1 (EBNA-1) (EBV nuclear antigen 1) (EC 3.1.21.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in EBV-NA1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupViral DNA-binding domain(304.15)

TT-groupViral DNA-binding domain(304.15.1)

FFamilyEBV-NA1(304.15.1.2)

Pfam Families

PF02905EBV-NA1

Epstein Barr virus nuclear antigen-1, DNA-binding domain

External Links

ECOD PDB View: 5WMF RCSB PDB: 5WMF PDBe: 5WMF UniProt: P03211

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure