ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xdeB3 - ECOD Domain | ECOD

ECOD/Domains/e5xdeB3

e5xdeB3

UID: 002100164

PDB

Range: B:15-121
PDB: 5XDE chain B(all domains)
UniProt: Q9LBX2 (all domains)
Gene: tdsC

Molecule: Thermophilic dibenzothiophene desulfurization enzyme C

3D Structure

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Related Domains

Browse other domains in Acyl-CoA_dh_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupAcyl-CoA dehydrogenase N-terminal domain-like(4033)

HH-groupAcyl-CoA dehydrogenase N-terminal domain-like(4033.1)

TT-groupAcyl-CoA dehydrogenase N-terminal domain-like(4033.1.1)

FFamilyAcyl-CoA_dh_N(4033.1.1.1)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247
dibenzothiophene83R

+ 1 additive (Glycerin)

Glycerin

Pfam Families

PF02771Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

ClanCL0544AcylCoA_ox_dh_N

External Links

ECOD PDB View: 5XDE RCSB PDB: 5XDE PDBe: 5XDE UniProt: Q9LBX2

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.